Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19047710_19048789_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19047710 - 19048789

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAAGCCG

5'SS Class:

major

3'SS Sequence:

TATGTAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATGTAAAA

Flanking Amino Acid:

FISNLLKKDMKSRLNCTQCL

Intron Amino Acid Position:

1679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.1

43.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

59.3

0.21

1.1

53.3

43.9

Minor 5ss

32.1

-2

3.4

39.7

40.1

Minor BPS

0.03

2.2

73.42

38.3

Associated Gene:

Gene:

MYLK

Ensembl Gene ID:

ENSAPLG00000005685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006041

19043087 - 19186671

143585