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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19048943_19056300_R


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
19048943 - 19056300

Intron Length:
7358

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTGAGTACT

5'SS Class:
major

3'SS Sequence:
GTTCTGCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGTCAC

U12 Branch Point Sequence:
TGTTCTGTGTCC

Flanking Amino Acid:
MWSIGVICYILVSGLSPFMG

Intron Amino Acid Position:
1628

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1
75.3
33.8

Major BPS
66.1
0.4
1.2
69.1
37.9

Major PPT
71.7
0.49
0.9
62.1
39.9

Minor 5ss
35.5
-1.6
2.9
49.8
40.3

Minor BPS
39.6
-0.8
3.7
65.85
40.5

Associated Gene:

Gene:
MYLK

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19043087 - 19186671
143585