Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19067284_19068132_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19067284 - 19068132

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

TGTATGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTATGGAAAT

Flanking Amino Acid:

DVYNIEERLGSGKFGQVFRL

Intron Amino Acid Position:

1446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.3

77.1

37.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

80.5

0.69

0.9

41.9

Minor 5ss

39.9

-1.1

2.8

53.6

37.3

Minor BPS

46.6

-0.1

2.3

75.14

41.3

Associated Gene:

Gene:

MYLK

Ensembl Gene ID:

ENSAPLG00000005685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006041

19043087 - 19186671

143585