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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19125335_19141714_R


Intron Information:

Intron Rank:
10

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
19125335 - 19141714

Intron Length:
16380

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAATACT

5'SS Class:
strong_major

3'SS Sequence:
CTTGACTTCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTGAC

U12 Branch Point Sequence:
CTCTTCTTGACT

Flanking Amino Acid:
ASCSAQVTVKEKKSSKKAES

Intron Amino Acid Position:
615

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.3
0.81
0.9
82.9
28.7

Major BPS
73.9
0.59
1
65.3
41.6

Major PPT
75.2
0.57
0.9
68.2
37.2

Minor 5ss
32.3
-2
2.8
43.2
43.8

Minor BPS
74.2
0.84
1.2
82.23
39.8

Associated Gene:

Gene:
MYLK

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19043087 - 19186671
143585