Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19555086_19579403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19555086 - 19579403

Intron Length:

24318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATACCA

5'SS Class:

major

3'SS Sequence:

TCTTTTTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGGAT

U12 Branch Point Sequence:

TCTTTTTTGACA

Flanking Amino Acid:

LCVFQQDVQQVLDWIENHGE

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

67.2

Major BPS

62.6

0.31

1.4

63.1

44.4

Major PPT

85.2

0.79

0.9

83.2

31.9

Minor 5ss

32.3

-2

40.9

44.8

Minor BPS

73.1

0.72

1.1

77.15

33.9

Associated Gene:

Gene:

KALRN

Ensembl Gene ID:

ENSAPLG00000006373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006708

19313998 - 19803253

489256