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Intron Name: Anas_platyrhynchos_platyrhynchos_7_195988_196310_F


Intron Information:

Intron Rank:
25

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
195988 - 196310

Intron Length:
323

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGCAC

5'SS Class:
strong_major

3'SS Sequence:
TCCTTTCACTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAC

U12 Branch Point Sequence:
TCTCCTTTCACT

Flanking Amino Acid:
HVLRSLTLNARGIFRLLAQY

Intron Amino Acid Position:
1010

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.3
0.9
0.9
73
38.2

Major BPS
77.7
0.69
1
81
30.2

Major PPT
73.6
0.53
0.8
73.5
30.4

Minor 5ss
31
-2.2
3.3
41
45.6

Minor BPS
64.8
0.55
1.8
80.9
41.2

Associated Gene:

Gene:
FAM126B

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

122670 - 198917
76248

182547 - 198206
15660

122670 - 198917
76248