Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19632479_19638188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19632479 - 19638188

Intron Length:

5710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCAGA

5'SS Class:

major

3'SS Sequence:

TGTTCTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GTGTAATGATCT

Flanking Amino Acid:

HQYIMEVQASGIELICEKDI

Intron Amino Acid Position:

835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.3

68.9

43.8

Major BPS

76.8

0.67

40.9

Major PPT

78.2

0.64

0.9

73.4

37.1

Minor 5ss

34.2

-1.8

2.7

40.9

44.9

Minor BPS

44.2

-0.3

2.1

64.35

Associated Gene:

Gene:

KALRN

Ensembl Gene ID:

ENSAPLG00000006373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006708

19313998 - 19803253

489256