Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19650568_19651514_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19650568 - 19651514

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTCATTT

5'SS Class:

weak_major

3'SS Sequence:

CTGTTTTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

TCTTTACTAACC

Flanking Amino Acid:

HLEQKEAFLKACTLARRNAE

Intron Amino Acid Position:

1045

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.4

65.1

41.6

Major BPS

76.8

0.67

0.9

75.9

Major PPT

80.6

0.69

0.8

80.5

31.5

Minor 5ss

53.3

0.11

2.6

74.4

41.8

Minor BPS

55.9

0.16

1.9

71.86

39.1

Associated Gene:

Gene:

KALRN

Ensembl Gene ID:

ENSAPLG00000006373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006708

19313998 - 19803253

489256