Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19654256_19654824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19654256 - 19654824

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGTAC

5'SS Class:

major

3'SS Sequence:

CTGACATTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGTTTCTGACAT

Flanking Amino Acid:

YVVFERSAKQALDWIQETGE

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

62.9

38.4

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

68.4

0.41

60.9

39.1

Minor 5ss

35.7

-1.6

3.5

49.3

47.3

Minor BPS

52.4

0.15

1.8

74.71

41.6

Associated Gene:

Gene:

KALRN

Ensembl Gene ID:

ENSAPLG00000006373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006708

19313998 - 19803253

489256