Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19661603_19663970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19661603 - 19663970

Intron Length:

2368

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTTTT

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTGACTGTAACT

Flanking Amino Acid:

NIQEIYDFHNNIFLKELEKY

Intron Amino Acid Position:

1322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

81.6

33.2

Major BPS

77.9

0.69

0.8

75.9

Major PPT

91.7

0.94

0.5

92.2

18.3

Minor 5ss

46.5

-0.4

3.1

66.5

Minor BPS

59.4

0.37

2.1

80.24

Associated Gene:

Gene:

KALRN

Ensembl Gene ID:

ENSAPLG00000006373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006708

19313998 - 19803253

489256