Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19779107_19780017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19779107 - 19780017

Intron Length:

911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGAAC

5'SS Class:

major

3'SS Sequence:

TCCACTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

TCCACTTCCACA

Flanking Amino Acid:

QPGDKYEQSKTDLGGCNGTS

Intron Amino Acid Position:

2272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

66.1

39.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

73.8

0.54

0.8

67.8

32.2

Minor 5ss

31.6

-2.1

3.3

42.7

44.4

Minor BPS

45.8

-0.3

55.57

43.8

Associated Gene:

Gene:

KALRN

Ensembl Gene ID:

ENSAPLG00000006373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024236

19733353 - 19803253

69901

ENSAPLT00000006708

19313998 - 19803253

489256