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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19799966_19800888_F


Intron Information:

Intron Rank:
57

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
19799966 - 19800888

Intron Length:
923

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGTACA

5'SS Class:
major

3'SS Sequence:
GGTTTGTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCACAT

U12 Branch Point Sequence:
TGATCTTTCACA

Flanking Amino Acid:
SPTSYILVLELMDDGRLLDY

Intron Amino Acid Position:
2695

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.9
0.61
1.1
74
36.3

Major BPS
77.7
0.69
1
83.3
27.7

Major PPT
79.6
0.67
1
72.9
42.2

Minor 5ss
38.9
-1.2
2.7
53.8
42.8

Minor BPS
63.9
0.43
1.7
72.84
39

Associated Gene:

Gene:
KALRN

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19733353 - 19803253
69901

19313998 - 19803253
489256