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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19808343_19808573_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

19808343 - 19808573

Intron Length:

231

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

ACGTGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

GACACCTCACAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.7

35.3

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

76.7

0.6

0.9

73.1

41.5

Minor 5ss

35.2

-1.7

2.7

39.3

40.3

Minor BPS

44.1

-0.3

1.9

56.64

44.9

Associated Gene:

Gene:

UMPS

Ensembl Gene ID:

ENSAPLG00000007365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007661

19808310 - 19813522

5213