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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19810906_19811533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19810906 - 19811533

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGATTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ACTAATTTCACT

Flanking Amino Acid:

IGNTVKHQYEGGTFKIASWS

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

83.2

28.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

85.3

0.79

0.7

83.9

24.1

Minor 5ss

34.9

-1.7

2.8

45.4

42.7

Minor BPS

48.5

-0

67.73

43.1

Associated Gene:

Gene:

UMPS

Ensembl Gene ID:

ENSAPLG00000007365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007661

19808310 - 19813522

5213

ENSAPLT00000033507

19807862 - 19813522

5661