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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19811710_19812245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19811710 - 19812245

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TGGTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

ATCGCTTGAAAC

Flanking Amino Acid:

LATGKYTEAAVQMAEENSDF

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

66.8

44.5

Major BPS

71.4

0.53

1.1

63.4

Major PPT

83.2

0.75

0.9

80.8

36.8

Minor 5ss

37.3

-1.4

2.7

48.1

41.6

Minor BPS

49.3

-0

1.6

58.58

40.4

Associated Gene:

Gene:

UMPS

Ensembl Gene ID:

ENSAPLG00000007365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033507

19807862 - 19813522

5661

ENSAPLT00000007661

19808310 - 19813522

5213