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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19828177_19840233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19828177 - 19840233

Intron Length:

12057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

CCCTTGTTACCT

Flanking Amino Acid:

CARYKGVLCSGHGECHCGEC

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

71.4

0.53

1.2

63.4

Major PPT

69.8

0.45

0.8

61.8

34.9

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

45.9

-0.2

2.3

61.99

48.4

Associated Gene:

Gene:

ITGB5

Ensembl Gene ID:

ENSAPLG00000007419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017466

19825458 - 19871445

45988

ENSAPLT00000007804

19821467 - 19871445

49979