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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19846874_19851049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19846874 - 19851049

Intron Length:

4176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TCTATCTGATGG

Flanking Amino Acid:

DAILQAAVCKEKIGWRKEAS

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

75.5

0.57

0.8

66.5

35.6

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

42.9

-0.6

48.13

45.3

Associated Gene:

Gene:

ITGB5

Ensembl Gene ID:

ENSAPLG00000007419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017466

19825458 - 19871445

45988

ENSAPLT00000007804

19821467 - 19871445

49979