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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19854243_19858772_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19854243 - 19858772

Intron Length:

4530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TGTATGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CCGCTCTCAACT

Flanking Amino Acid:

PQKVALSLRPGDQTSFRVQV

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

66.2

39.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

71.4

0.48

1.1

65.3

45.4

Minor 5ss

30.5

-2.2

2.8

37.9

39.5

Minor BPS

53.2

0.18

1.6

64.85

45.7

Associated Gene:

Gene:

ITGB5

Ensembl Gene ID:

ENSAPLG00000007419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017466

19825458 - 19871445

45988

ENSAPLT00000007804

19821467 - 19871445

49979