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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19858978_19867889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19858978 - 19867889

Intron Length:

8912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCACCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TTTTGCCCACCT

Flanking Amino Acid:

HPKCAWCSKEEFGSTRSVPS

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.3

44.3

Major BPS

77.7

0.69

30.2

Major PPT

79.4

0.66

0.8

73.5

Minor 5ss

-2.2

3.3

40.6

45.6

Minor BPS

-0.2

2.4

76.94

45.3

Associated Gene:

Gene:

ITGB5

Ensembl Gene ID:

ENSAPLG00000007419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017466

19825458 - 19871445

45988

ENSAPLT00000007804

19821467 - 19871445

49979