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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19867976_19871087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19867976 - 19871087

Intron Length:

3112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CTCTTGCTGAAG

Flanking Amino Acid:

VLAALLQPGRGLNMCTSGSA

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

70.2

0.46

1.1

71.2

33.5

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

38.3

-1

2.3

43.24

42.6

Associated Gene:

Gene:

ITGB5

Ensembl Gene ID:

ENSAPLG00000007419

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017466

19825458 - 19871445

45988

ENSAPLT00000007804

19821467 - 19871445

49979