Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19892134_19893076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19892134 - 19893076

Intron Length:

943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTCTAATAAAT

Flanking Amino Acid:

FYYDSSTCYPGKIFPGTITL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

100

1.24

0.5

100

Major PPT

84.1

0.77

0.8

78.2

34.9

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

49.6

0.05

1.9

77.14

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008516

19880111 - 19894249

14139