Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19914842_19915461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19914842 - 19915461

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTCTTGTCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAG

U12 Branch Point Sequence:

CTGTCTCTAAGT

Flanking Amino Acid:

FGLGGFNCGNPYQLITVVIA

Intron Amino Acid Position:

1245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

71.9

39.6

Major BPS

58.2

0.2

1.5

67.3

37.8

Major PPT

76.1

0.59

0.8

69.4

36.9

Minor 5ss

37.9

-1.4

2.7

48.5

40.3

Minor BPS

0.14

71.87

45.4

Associated Gene:

Gene:

HEG1

Ensembl Gene ID:

ENSAPLG00000021885

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032873

19909035 - 19933991

24957