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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19957976_19960295_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19957976 - 19960295

Intron Length:

2320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACATACTGACTT

Flanking Amino Acid:

IGQVSPGLPLGAAANFSLFS

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

83.1

30.9

Major BPS

100

1.24

0.5

100

Major PPT

85.4

0.8

0.6

81.5

23.5

Minor 5ss

31.5

-2.1

2.7

41.5

Minor BPS

46.2

-0.2

1.9

61.1

42.6

Associated Gene:

Gene:

SLC12A8

Ensembl Gene ID:

ENSAPLG00000008520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026409

19955127 - 20003134

48008

ENSAPLT00000008862

19955127 - 20003134

48008