Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_19960414_19962730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19960414 - 19962730

Intron Length:

2317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

GTCTTTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAA

U12 Branch Point Sequence:

GTCTTTTCAACA

Flanking Amino Acid:

FCNHWVSFAGAIVSLIIMFV

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

34.8

Major BPS

60.4

0.26

1.1

61.5

32.5

Major PPT

77.2

0.61

0.9

73.3

Minor 5ss

39.4

-1.2

2.9

52.2

44.4

Minor BPS

60.1

0.31

1.5

67.57

39.2

Associated Gene:

Gene:

SLC12A8

Ensembl Gene ID:

ENSAPLG00000008520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026409

19955127 - 20003134

48008

ENSAPLT00000008862

19955127 - 20003134

48008