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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19962829_19963667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19962829 - 19963667

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCCTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTCCTTTGCT

Flanking Amino Acid:

VPALCSQKVEESSVRQQNLE

Intron Amino Acid Position:

584

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

87.3

0.93

0.8

36.5

Major PPT

78.6

0.64

0.8

70.7

36.1

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

51.2

0.12

3.7

92.33

36.7

Associated Gene:

Gene:

SLC12A8

Ensembl Gene ID:

ENSAPLG00000008520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026409

19955127 - 20003134

48008

ENSAPLT00000008862

19955127 - 20003134

48008