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Intron Name: Anas_platyrhynchos_platyrhynchos_7_19970830_19971954_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19970830 - 19971954

Intron Length:

1125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

TTGTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAAAAT

U12 Branch Point Sequence:

TTGGTGAAAATT

Flanking Amino Acid:

PLGSLAAIGTSWFLYMVFVF

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.3

79.7

35.3

Major BPS

55.4

0.14

1.3

61.7

41.5

Major PPT

0.74

0.9

77.3

Minor 5ss

38.9

-1.2

2.8

39.1

Minor BPS

-0.7

2.4

59.28

Associated Gene:

Gene:

SLC12A8

Ensembl Gene ID:

ENSAPLG00000008520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026409

19955127 - 20003134

48008

ENSAPLT00000008862

19955127 - 20003134

48008