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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20021124_20021453_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20021124 - 20021453

Intron Length:
330

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGATGT

5'SS Class:
strong_major

3'SS Sequence:
GTGTATTCTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTAAA

U12 Branch Point Sequence:
TTTTCTCTAATT

Flanking Amino Acid:
KPYQCEYCLQYFSRTDRVLK

Intron Amino Acid Position:
262

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.6
0.98
0.8
81.6
33.2

Major BPS
73.8
0.59
0.9
74
26.8

Major PPT
76.4
0.59
1
69.9
41.2

Minor 5ss
39.7
-1.2
3.1
56.6
47.5

Minor BPS
75
0.86
1.6
92.5
29.7

Associated Gene:

Gene:
ZNF148

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20019206 - 20033195
13990

20019206 - 20033195
13990

20019206 - 20033195
13990