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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20027777_20028437_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
20027777 - 20028437

Intron Length:
661

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGCTT

5'SS Class:
major

3'SS Sequence:
TATATTGTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAC

U12 Branch Point Sequence:
TAGTTATTAACT

Flanking Amino Acid:
HLQRHVFIHTGEKPFQCSQC

Intron Amino Acid Position:
194

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.9
0.49
1.1
66.4
44.6

Major BPS
81.9
0.79
0.8
81.9
25

Major PPT
67
0.38
1.2
64.2
45.7

Minor 5ss
35.7
-1.6
3.7
56.5
47.7

Minor BPS
69.1
0.68
1.6
82.12
38.9

Associated Gene:

Gene:
ZNF148

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20019206 - 20033195
13990

20019206 - 20033195
13990