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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20077627_20081763_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20077627 - 20081763

Intron Length:

4137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATTTTTTCACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTATTTGACG

Flanking Amino Acid:

GLQSAGHHMDVYAASIDDIL

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

77.4

37.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.7

0.9

75.2

Minor 5ss

40.4

-1.1

2.8

53.8

42.8

Minor BPS

62.6

0.25

1.6

67.16

40.9

Associated Gene:

Gene:

SNX4

Ensembl Gene ID:

ENSAPLG00000009074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009479

20073145 - 20104450

31306