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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20081830_20083309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20081830 - 20083309

Intron Length:

1480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCGTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAT

U12 Branch Point Sequence:

TTTTTCGTACAG

Flanking Amino Acid:

KVHGNYGRVFSEWSAIEKEM

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

63.5

0.34

1.4

57.1

49.4

Major PPT

81.6

0.71

0.9

76.5

37.7

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

47.2

-0.3

2.3

63.72

44.3

Associated Gene:

Gene:

SNX4

Ensembl Gene ID:

ENSAPLG00000009074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009479

20073145 - 20104450

31306