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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20103405_20104363_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20103405 - 20104363

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGGTG

5'SS Class:

major

3'SS Sequence:

CTCCCCTAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTACAT

U12 Branch Point Sequence:

GTTACATGAATC

Flanking Amino Acid:

PGSEPQPPDTMEDCLAKKME

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

64.2

41.9

Major BPS

0.37

1.3

Major PPT

54.7

0.11

1.1

56.3

31.5

Minor 5ss

27.9

-2.5

3.6

38.1

46.8

Minor BPS

53.1

0.08

1.8

66.65

38.3

Associated Gene:

Gene:

SNX4

Ensembl Gene ID:

ENSAPLG00000009074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009479

20073145 - 20104450

31306