Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20143164_20144160_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20143164 - 20144160

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTAAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTCTCTTTAAAT

Flanking Amino Acid:

PWCTKYFLKEGDGWVYHKPL

Intron Amino Acid Position:

790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

72.6

37.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.9

0.63

0.9

70.9

38.4

Minor 5ss

37.2

-1.4

2.9

46.5

35.3

Minor BPS

78.4

0.97

1.3

88.96

35.8

Associated Gene:

Gene:

OSBPL11

Ensembl Gene ID:

ENSAPLG00000009471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009881

20142933 - 20175852

32920