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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20159925_20160695_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20159925 - 20160695

Intron Length:
771

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGTAT

5'SS Class:
major

3'SS Sequence:
ATTTATTCACTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTTAT

U12 Branch Point Sequence:
TATTTATTCACT

Flanking Amino Acid:
TQHHTEAIGKNNPPLKSRSF

Intron Amino Acid Position:
225

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1
70.2
36.1

Major BPS
88.7
0.96
0.8
78
36.5

Major PPT
70.7
0.47
0.9
64.4
41.7

Minor 5ss
44.6
-0.6
3.2
64.1
47.4

Minor BPS
58.8
0.36
2
82.01
39.1

Associated Gene:

Gene:
OSBPL11

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20142933 - 20175852
32920