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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20162388_20175505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20162388 - 20175505

Intron Length:

13118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

CTTTTTGTGATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TATTATCTGATT

Flanking Amino Acid:

GGRGAKGWHYSDHMENIYGY

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

62.3

43.9

Major BPS

75.9

0.64

66.1

40.5

Major PPT

74.3

0.55

72.2

Minor 5ss

32.9

-2

3.1

39.9

45.9

Minor BPS

50.1

0.08

1.8

73.52

37.3

Associated Gene:

Gene:

OSBPL11

Ensembl Gene ID:

ENSAPLG00000009471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009881

20142933 - 20175852

32920