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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20190895_20192258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20190895 - 20192258

Intron Length:

1364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCACTTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATTGTTTCACT

Flanking Amino Acid:

LPGYKIPKNVVAVPDVAEAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

72.6

0.51

0.9

64.6

41.1

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

0.08

2.2

72.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010158

20184971 - 20199241

14271