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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20205506_20206472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20205506 - 20206472

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTTATTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTT

Flanking Amino Acid:

ASNLSRVAPIDLCSCSSNLV

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.4

44.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

90.1

24.5

Minor 5ss

38.3

-1.3

3.1

45.9

44.6

Minor BPS

64.6

0.54

1.5

79.7

Associated Gene:

Gene:

LMLN

Ensembl Gene ID:

ENSAPLG00000009923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010337

20205411 - 20217839

12429