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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20225455_20226648_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20225455 - 20226648

Intron Length:

1194

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCATCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CCTTCTTTATCT

Flanking Amino Acid:

SQVKEECAQYAGQVQNGFIT

Intron Amino Acid Position:

1219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

74.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

81.1

0.7

0.8

73.8

35.9

Minor 5ss

45.7

-0.4

2.5

54.4

45.2

Minor BPS

67.1

0.61

1.6

79.06

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010494

20219296 - 20240322

21027

ENSAPLT00000026313

20218328 - 20240322

21995