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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20227568_20228507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20227568 - 20228507

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

AATGTTTTAAGA

Flanking Amino Acid:

ENCSNAAPQPSFIKSVSTEE

Intron Amino Acid Position:

1148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

90.7

21.1

Major BPS

75.6

0.64

1.5

34.5

Major PPT

89.9

0.9

0.6

84.8

22.8

Minor 5ss

47.8

-0.2

2.8

67.5

37.3

Minor BPS

52.9

0.09

1.7

61.79

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026313

20218328 - 20240322

21995

ENSAPLT00000010494

20219296 - 20240322

21027