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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20228572_20229052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20228572 - 20229052

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAG

U12 Branch Point Sequence:

CTATCTTTAGTA

Flanking Amino Acid:

LHPDDTDNVQAFTRELEHRA

Intron Amino Acid Position:

1127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.8

38.5

Major BPS

59.9

0.25

1.6

59.6

46.8

Major PPT

83.2

0.75

0.7

77.2

31.5

Minor 5ss

38.8

-1.3

3.4

58.1

46.5

Minor BPS

61.3

0.35

1.6

67.69

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026313

20218328 - 20240322

21995

ENSAPLT00000010494

20219296 - 20240322

21027