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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20234625_20238126_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20234625 - 20238126

Intron Length:

3502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTAAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTCTGTTAAAA

Flanking Amino Acid:

PDAMSNLQRKDVEVLQKTES

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

55.9

0.13

1.2

57.9

40.4

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

55.5

0.17

2.1

73.75

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026313

20218328 - 20240322

21995

ENSAPLT00000010494

20219296 - 20240322

21027