Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20251484_20258865_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20251484 - 20258865

Intron Length:

7382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGCG

5'SS Class:

major

3'SS Sequence:

CCGCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CCGGGGTGACCC

Flanking Amino Acid:

QLAGTLVGALAATQAPKQAV

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

62.4

42.4

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

0.41

0.8

61.3

29.1

Minor 5ss

31.8

-2.1

3.3

37.6

42.5

Minor BPS

31.3

-1.4

2.3

33.56

42.2

Associated Gene:

Gene:

DNPEP

Ensembl Gene ID:

ENSAPLG00000012698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013229

20247676 - 20260017

12342