About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20260812_20260918_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
20260812 - 20260918

Intron Length:
107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTACC

5'SS Class:
major

3'SS Sequence:
CCGTGCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTCAC

U12 Branch Point Sequence:
GTCACCACAACC

Flanking Amino Acid:
AENNLAAFRADVDAATLARI

Intron Amino Acid Position:
193

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.1
0.5
1.1
68.2
36.6

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
64.4
0.32
0.9
54
36.6

Minor 5ss
34.5
-1.8
2.8
48.2
40.4

Minor BPS
48.8
-0.1
1.9
61.67
42.9

Associated Gene:

Gene:
DES

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

20258636 - 20453993
195358

20258635 - 20339546
80912