Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20261268_20261345_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20261268 - 20261345

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGCGCG

5'SS Class:

major

3'SS Sequence:

CGAATCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGAAT

U12 Branch Point Sequence:

GAGCCCCGAATC

Flanking Amino Acid:

AEAEEWYKSKVNDLTQAANK

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

56.9

42.5

Major BPS

47.9

-0.1

1.4

55.2

38.9

Major PPT

64.3

0.32

54.3

41.1

Minor 5ss

30.1

-2.3

3.4

38.6

46.6

Minor BPS

45.9

-0.3

1.7

52.09

38.4

Associated Gene:

Gene:

DES

Ensembl Gene ID:

ENSAPLG00000027827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022918

20258635 - 20339546

80912

ENSAPLT00000045083

20258636 - 20453993

195358