Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20261472_20262151_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20261472 - 20262151

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GCCCGCTGACCC

Flanking Amino Acid:

TCEIDALKGTNDSLMRQMRE

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.1

54.4

44.7

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

68.5

0.42

0.9

58.3

38.4

Minor 5ss

33.3

-1.9

3.1

42.7

44.3

Minor BPS

40.8

-0.7

45.01

43.1

Associated Gene:

Gene:

DES

Ensembl Gene ID:

ENSAPLG00000027827

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022918

20258635 - 20339546

80912

ENSAPLT00000045083

20258636 - 20453993

195358