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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20266160_20276614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20266160 - 20276614

Intron Length:

10455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGTCCCCTCACC

Flanking Amino Acid:

SAVLAIIDMEDSETGEDEPS

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.8

85.2

31.7

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.4

0.62

0.7

69.1

31.4

Minor 5ss

34.9

-1.7

3.2

49.5

46.5

Minor BPS

52.1

0.05

2.1

69.97

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543