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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20276705_20276890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20276705 - 20276890

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGCCGC

5'SS Class:

major

3'SS Sequence:

CCTCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GGCGGCTCACCC

Flanking Amino Acid:

QDETAFSTPTGGSDTLVDAS

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

54.1

45.2

Major BPS

52.1

0.05

1.3

41.8

Major PPT

81.7

0.71

0.7

72.7

32.1

Minor 5ss

32.3

-2

33.6

41.9

Minor BPS

39.1

-0.8

2.1

43.58

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543