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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20279841_20280171_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20279841 - 20280171

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

TCTCCCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CGCCCCCTCACA

Flanking Amino Acid:

RRARPTSPELESSDDSYVSA

Intron Amino Acid Position:

732

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.5

0.62

0.9

72.5

32.1

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

45.4

-0.3

2.1

54.12

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543