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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20280987_20282682_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20280987 - 20282682

Intron Length:

1696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGCGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

AGCTCCTTACCC

Flanking Amino Acid:

CCSAILSVRPAPAVERHGNL

Intron Amino Acid Position:

841

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

68.9

0.47

59.6

38.6

Major PPT

63.8

0.31

38.5

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

64.8

0.45

1.7

69.43

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543