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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20283106_20283305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20283106 - 20283305

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TGTCCCCGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTGAC

U12 Branch Point Sequence:

CCGGGCGTGACC

Flanking Amino Acid:

VRGEPKPIIYWLRNRQPVKY

Intron Amino Acid Position:

941

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

64.1

41.7

Major BPS

46.4

-0.2

1.4

36.7

42.3

Major PPT

62.3

0.28

1.1

58.1

38.4

Minor 5ss

29.2

-2.4

2.7

30.6

36.2

Minor BPS

39.4

-0.8

2.3

44.25

44.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543