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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20286781_20286857_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20286781 - 20286857

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACCCCC

5'SS Class:

weak_major

3'SS Sequence:

TCTCGCCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GTCTCGCCACGC

Flanking Amino Acid:

PPPAVTWTHFGQPVQEGENV

Intron Amino Acid Position:

1142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.3

51.9

45.3

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

68.2

0.41

0.9

33.7

Minor 5ss

45.2

-0.5

2.9

61.8

42.6

Minor BPS

32.5

-1.3

2.5

43.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543